Index

_

__call__() (in module zetta_utils.training.datasets.sample_indexers.VolumetricStridedIndexer)

A

ACED Affinities

Agglomeration Alignment astype() (in module zetta_utils.tensor_ops.convert)

B

build() (in module zetta_utils.builder) build_cv_layer() (in module zetta_utils.layer.volumetric.cloudvol)

build_layer_set() (in module zetta_utils.layer) build_subchunkable_apply_flow() (in module zetta_utils.mazepa_layer_processing.common.subchunkable_apply_flow)

C

ChainIndexer (class in zetta_utils.training.datasets.sample_indexers)

CloudVolume, cv ConvBlock (class in zetta_utils.convnet.architecture)

E

EM

F

FIB-SEM Field Flow

FlowSchema from_coords() (in module zetta_utils.geometry.bbox.BBox3D) from_slices() (in module zetta_utils.geometry.bbox.BBox3D)

G

GCP get_all_chunk_bboxes() (in module zetta_utils.geometry.BBoxStrider)

get_matching_entry() (in module zetta_utils.builder) get_nth_chunk_bbox() (in module zetta_utils.geometry.BBoxStrider) get_slice() (in module zetta_utils.geometry.bbox.BBox3D)

I

Inference

J

JointDataset (class in zetta_utils.training.datasets)

L

LayerDataset (class in zetta_utils.training.datasets)

lightning_train() (in module zetta_utils.training.lightning.train)

M

Mazepa MIP, MIP level

module zetta_utils

N

ndim (zetta_utils.geometry.bbox.BBox3D attribute)

Neuroglancer, ng

O

Operation

P

padded() (in module zetta_utils.geometry.bbox.BBox3D)

precomputed

R

RandomIndexer (class in zetta_utils.training.datasets.sample_indexers)

register() (in module zetta_utils.builder)

S

Section Segmentation

SEM SQS

T

Task TEM to_np() (in module zetta_utils.tensor_ops.convert)

to_slices() (in module zetta_utils.geometry.bbox.BBox3D) to_torch() (in module zetta_utils.tensor_ops.convert) translated() (in module zetta_utils.geometry.bbox.BBox3D)

U

UNet (class in zetta_utils.convnet.architecture)

unregister() (in module zetta_utils.builder)

V

visualize_list() (in module zetta_utils.viz.widgets)

VolumetricStridedIndexer (class in zetta_utils.training.datasets.sample_indexers)

W

Watershed

Z

zetta_utils module

zetta_utils.geometry.BBoxStrider (built-in class)